Multiscale Systems Biology Collaboration
Papers
N. W. Henderson, S. Kim, D. Ma, M. A. Saunders, Y. Sun, R. M. T. Fleming, and I. Thiele,
Conservation analysis of genomescale biochemical networks,
Bioinformatics, in preparation, Feb 2016.
D. Ma and M. A. Saunders,
Solving multiscale linear programs using the simplex method in quadruple precision,
pp. 223235 in M. AlBaali, L. Grandinetti, and A. Purnama (eds.),
Numerical Analysis and Optimization,
NAOIII, Muscat, Oman, January 2014,
Springer Proceedings in Mathematics and Statistics, Volume 134,
Springer International Publishing Switzerland 2015.
A. Ebrahim, E. Almaas, E. Bauer, A Bordbar, AP Burgard, RL Chang,
A. Drager, I. Famili, A. M. Feist, R. M. T. Fleming,
S. S. Fong, V. Hatzimanikatis, M. J. Herrgard, A. Holder,
M. Hucka, D. Hyduke, N. Jamshidi, S. Y. Lee, N. Le, Novere,
J. A. Lerman, N. E. Lewis, D. Ma, R. Mahadevan, C. Maranas,
H. Nagarajan, A. Navid, J. Nielsen, L. K. Nielsen, J. Nogales,
A. Noronha, C. Pal, B. O. Palsson, J. A. Papin, K. R. Patil,
N. D. Price, J. L. Reed, M. Saunders, R. S. Senger, N. Sonnenschein,
Y. Sun, and I. Thiele,
Do genomescale models need exact solvers or clearer standards?,
Molecular Systems Biology 11:831 (2015), 3 pp.
J. A. Lerman, D. R. Hyduke, H. Latif, V. A. Portnoy, N. E. Lewis, J. D. Orth,
A. C. SchrimpeRutledge, R. D. Smith, J. N. Adkins, K. A. Zengler, and B. O. Palsson,
In silico method for modelling metabolism and gene product expression at genome scale,
Nat. Commun. 3 (2012) 929.
