MRIQC: individual anatomical report

Summary

• Subject ID: 50554.
• Workflow details:
  • Noise variance in the background is very low.
  • File has no metadata (sidecar JSON file missing or empty)
• Image parameters:

  cjv			0.609114825726
  cnr			1.03135859966
  efc			0.409439305992
  fber			568.35925293
  fwhm	avg		5.8464
  fwhm	x		6.69389
  fwhm	y		5.8481
  fwhm	z		5.10472
  icvs	csf		0.186455278722
  icvs	gm		0.473639254605
  icvs	wm		0.339905466673
  inu	med		0.72933614254
  inu	range		0.402688130736
  qi	1		0.0
  qi	2		0.0247205129722
  rpve	csf		73577.203125
  rpve	gm		159109.859375
  rpve	wm		76505.0703125
  size	x		160
  size	y		256
  size	z		256
  snr	csf		4.39810867639
  snr	gm		11.8170502298
  snr	total		9.84969711884
  snr	wm		13.3339324503
  snrd	csf		-1.0
  snrd	gm		-1.0
  snrd	total		-1.0
  snrd	wm		-1.0
  spacing	x		1.0
  spacing	y		1.0
  spacing	z		1.0
  summary	bg	k	0.78875308814
  summary	bg	mean	2.37584233284
  summary	bg	p05	0.0
  summary	bg	p95	9.0
  summary	bg	stdv	3.54327058792
  summary	csf	k	-0.336403543869
  summary	csf	mean	145.20753479
  summary	csf	p05	77.0
  summary	csf	p95	223.0
  summary	csf	stdv	44.6654663086
  summary	gm	k	-0.330534464871
  summary	gm	mean	225.772644043
  summary	gm	p05	157.0
  summary	gm	p95	306.0
  summary	gm	stdv	45.1662788391
  summary	wm	k	-0.401480093811
  summary	wm	mean	333.403167725
  summary	wm	p05	237.0
  summary	wm	p95	425.0
  summary	wm	stdv	56.1731948853
  tpm	overlap	csf	0.259314009245
  tpm	overlap	gm	0.590397683655
  tpm	overlap	wm	0.619675171583
  wm2max			0.743875278396

Visual reports

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the user guide.