[log] logfile log.txt [exon_annotation] probeset_annotation HuEx-1_0-st-v2.na24.hg18.probeset.csv pgf_file HuEx-1_0-st-v2.r2.pgf clf_file HuEx-1_0-st-v2.r2.clf num_cells 6553600 cell_dim 2560 [exon_data] folder HumanData/ exon_cel_files huex_wta_cerebellum_A.CEL,huex_wta_cerebellum_B.CEL,huex_wta_cerebellum_C.CEL,huex_wta_heart_A.CEL,huex_wta_heart_B.CEL,huex_wta_heart_C.CEL,huex_wta_liver_A.CEL,huex_wta_liver_B.CEL,huex_wta_liver_C.CEL [output] presence_absence_output_file PresenceAbsenceMedianGC [model] array_type exon method median_gc calculate_presence_absence true mat_training_probe_type background