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Stanford University

Journal Publications

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Adaptable microfluidic system for single-cell pathogen classification and antimicrobial susceptibility testing. Li H, Torab P, Mach KE, Surrette C, England MR, Craft DW, Thomas NJ, Liao JC, Puleo C, Wong PK. PNAS May 21, 2019, 116(21) 10270-10279
CD47-Targeted Near-infrared Photoimmunotherapy for Human Bladder Cancer. Kiss B, van den Berg NS, Ertsey R, McKenna K, Mach KE, Zhang CA, Volkmer JP, Weissman IL, Rosenthal EL, Liao JC. Clin Cancer Res. 2019 Mar 19..

Nanotube assisted microwave electroporation for single cell pathogen identification and antimicrobial susceptibility testing. Gao J, Li H, Torab P, Mach KE, Craft DW, Thomas NJ, Puleo CM, Liao JC, Wang TH, Wong PK. Nanomedicine. 2019 Apr;17:246-253.

Optimizing peptide nucleic acid probes for hybridization-based detection and identification of bacterial pathogens.Mach KE, Kaushik AM, Hsieh K, Wong PK, Wang TH, Liao JC.Analyst. 2019 Feb 25;144(5):1565-1574.
Detection and Surveillance of Bladder Cancer Using Urine Tumor DNA. Dudley JC, Schroers-Martin J, Lazzareschi DV, Shi WY, Chen SB, Esfahani MS, Trivedi D, Chabon JJ, Chaudhuri AA, Stehr H, Liu CL, Lim H, Costa HA, Nabet BY, Sin MLY, Liao JC, Alizadeh AA, Diehn M.Cancer Discov. 2019 Apr;9(4):500-509.
Organoid Modeling of the Tumor Immune Microenvironment.Neal JT, Li X, Zhu J, Giangarra V, Grzeskowiak CL, Ju J, Liu IH, Chiou SH, Salahudeen AA, Smith AR, Deutsch BC, Liao L, Zemek AJ, Zhao F, Karlsson K, Schultz LM, Metzner TJ, Nadauld LD, Tseng YY, Alkhairy S, Oh C, Keskula P, Mendoza-Villanueva D, De La Vega FM, Kunz PL, Liao JC, Leppert JT, Sunwoo JB, Sabatti C, Boehm JS, Hahn WC, Zheng GXY, Davis MM, Kuo CJ. Cell. 2018 Dec 13;175(7):1972-1988.e16.

Surface-Enhanced Raman Scattering Nanoparticles for Multiplexed Imaging of Bladder Cancer Tissue Permeability and Molecular Phenotype. Davis RM, Kiss B, Trivedi DR, Metzner TJ, Liao JC, Gambhir SS. ACS Nano. 2018 Oct 23;12(10):9669-9679.

Optical and Cross-Sectional Imaging Technologies for Bladder Cancer. Kiss B, Marcq G, Liao JC. Cancer Treat Res. 2018;175:139-163.

Validation of Confocal Laser Endomicroscopy Features of Bladder Cancer: The Next Step Towards Real-time Histologic Grading. Liem EIML, Freund JE, Savci-Heijink CD, de la Rosette JJMCH, Kamphuis GM, Baard J, Liao JC, van Leeuwen TG, de Reijke TM, de Bruin DM. Eur Urol Focus. 2018 Jul 19. pii: S2405-4569(18)30178-0.

Rapid Microbiology Screening in Pharmaceutical Workflows. Surrette C, Scherer B, Corwin A, Grossmann G, Kaushik AM, Hsieh K, Zhang P, Liao JC, Wong PK, Wang TH, Puleo CM. SLAS Technol. 2018 Aug;23(4):387-394.
Simple and Precise Counting of Viable Bacteria by Resazurin-Amplified Picoarray Detection. Hsieh K, Zec HC, Chen L, Kaushik AM, Mach KE, Liao JC, Wang TH. Anal Chem. 2018 Aug 7;90(15):9449-9456.
Blue light cystoscopy for the diagnosis of bladder cancer: Results from the US prospective multicenter registry.Daneshmand S, Bazargani ST, Bivalacqua TJ, Holzbeierlein JM, Willard B, Taylor JM, Liao JC, Pohar K, Tierney J, Konety B; Blue Light Cystoscopy with Cysview Registry Group. Urol Oncol. 2018 Aug;36(8):361.e1-361.e6.
Development of a 90-Minute Integrated Noninvasive Urinary Assay for Bladder Cancer Detection. Wallace E, Higuchi R, Satya M, McCann L, Sin MLY, Bridge JA, Wei H, Zhang J, Wong E, Hiar A, Mach KE, Scherr D, Egerdie RB, Ohta S, Sexton WJ, Meng MV, Weizer AZ, Woods M, Jansz GK, Zadra J, Lotan Y, Goldfarb B, Liao JC. J Urol. 2018 Mar;199(3):655-662.
In vivo biodistribution and toxicity of intravesical administration of quantum dots for optical molecular imaging of bladder cancer. Pan Y, Chang T, Marcq G, Liu C, Kiss B, Rouse R, Mach KE, Cheng Z, Liao JC. Sci Rep. 2017 Aug 24;7(1):9309.
Proceedings of the 3rd Annual Albert Institute for Bladder Cancer Research Symposium.Flaig TW, Kamat AM, Hansel D, Ingersoll MA, Barton Grossman H, Mendelsohn C, DeGraff D, Liao JC, Taylor JA 3rd. Bladder Cancer. 2017 Jul 27;3(3):211-223.
Image-Guided Transurethral Resection of Bladder Tumors - Current Practice and Future Outlooks. Chang TC, Marcq G, Kiss B, Trivedi DR, Mach KE, Liao JC. Bladder Cancer. 2017 Jul 27;3(3):149-159.
Accelerating bacterial growth detection and antimicrobial susceptibility assessment in integrated picoliter droplet platform. Kaushik AM, Hsieh K, Chen L, Shin DJ, Liao JC, Wang TH. Biosens Bioelectron. 2017 Nov 15;97:260-266.
3D reconstruction of cystoscopy videos for comprehensive bladder records. Lurie KL, Angst R, Zlatev DV, Liao JC, Ellerbee Bowden AK. Biomed Opt Express 2017, 8(4) 2106-2123.
New and developing diagnostic technologies for urinary tract infections. Davenport M, Mach KE, Shortliffe LM, Banaei N, Wang TH, Liao JC. Nat Rev Urol. 2017 Mar 1.
Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics. Sin ML, Mach KE, Sinha R, Wu F, Trivedi D, Altobelli E, Jensen KC, Sahoo D, Lu Y, Liao JC. Clin Cancer Res. 2017 Feb 13.
Oncologic Procedures Amenable to Fluorescence-guided Surgery. Tipirneni KE, Warram JM, Moore LS, Prince AC, de Boer E, Jani AH, Wapnir IL, Liao JC, Bouvet M, Behnke NK, Hawn MT, Poultsides GA, Vahrmeijer AL, Carroll WR, Zinn KR, Rosenthal E. Ann Surg. 2016 Dec 30.
Registration of free-hand OCT daughter endoscopy to 3D organ reconstruction. Lurie KL, Angst R, Seibel EJ, Liao JC, Ellerbee Bowden AK. Biomed Opt Express.  2016 Nov 8;7(12):4995-5009.
A Multiplex Electrochemical Biosensor for Bloodstream Infection Diagnosis. Gao J, Jeffries L, Mach KE, Craft DW, Thomas NJ, Gau V, Liao JC, Wong PK.J Lab Autom. 2016 May 1:2211068216651232.
Long-range electrothermal fluid motion in microfluidic systems. Lu Y, Ren Q, Liu T, Leung SL, Gau V, Liao JC, Chan CL, Wong PK. Int J Heat Mass Transf. 2016 Jul;98:341-349.
Multimodal 3D cancer-mimicking optical phantom. Smith GT, Lurie KL, Zlatev DV, Liao JC, Ellerbee Bowden AK.Biomed Opt Express. 2016 Jan 25;7(2):648-62.
Intraoperative Optical Biopsy during Robotic Assisted Radical Prostatectomy Using Confocal Endomicroscopy.Lopez A, Zlatev DV, Mach KE, Bui D, Liu JJ, Rouse RV, Harris T, Leppert JT, Liao JC. J Urol. 2016 Apr;195(4 Pt 1):1110-7.
Rapid bladder cancer cell detection from clinical urine samples using an ultra-thin silicone membrane. Appel JH, Ren H, Sin ML, Liao JC, Chae J.Analyst. 2016  Jan 21;141(2):652-60.
Navigation During Oncologic Surgery: A Consensus Report. Rosenthal EL, Warram JM, de Boer E, Basilion JP, Biel MA, Bogyo M, Bouvet M,  Brigman BE, Colson YL, DeMeester SR, Gurtner GC, Ishizawa T, Jacobs PM, Keereweer S, Liao JC, Nguyen QT, Olson JM, Paulsen KD, Rieves D, Sumer BD, Tweedle MF, Vahrmeijer AL, Weichert JP, Wilson BC, Zenn MR, Zinn KR, van Dam GM.J Nucl Med. 2016 Jan;57(1):144-50.
Optical Biopsy of Peripheral Nerve Using Confocal Laser Endomicroscopy: A New Tool for Nerve Surgeons ? Crowe CS, Liao JC, Curtin CM.Arch Plast Surg. 2015 Sep;42(5):626-9.
Optical Biopsy of Bladder Cancer Using Crowd-Sourced Assessment. Chen SP, Kirsch S, Zlatev DV, Chang T, Comstock B, Lendvay TS, Liao JC. JAMA Surg. 2015 Sep 30:1-3.

A Pilot Study of In Vivo Confocal Laser Endomicroscopy of Upper Tract Urothelial Carcinoma. Bui D, Mach KE, Zlatev DV, Rouse RV, Lepprt JT, Liao JC. J Endourol. 2015 Sep 28.

Fiber-optic Confocal Laser Endomicroscopy of Small Renal Masses: Towards Real-time Optical Diagnostic Biopsy .Su LM, Kuo J, Allan RW, Liao JC, Ritari KL, Tomeny PE, Carter CM. J Urol. 2015 Aug 27.

Development of a Biosensor-Based Rapid Urine Test for Detection of Urogenital Schistosomiasis. Mach KE, Mohan R, Patel S, Wong PK, Hsieh M, Liao JC. PLoS Negl Trop Dis. 2015, 9(7):e0003845.

Role of Narrow Band Imaging in Management of Urothelial Carcinoma. Altobelli E, Zlatev DV, Liao JC. Curr Urol Rep. 2015, 16(8):58

Advances in imaging technologies in the evaluation of high-grade bladder cancer. Zlatev DV, Altobelli E, Liao JC. Urol Clin North Am. 2015, 42(2):147-57

AC electrokinetics of physiological fluids for biomedical applications. Lu Y, Liu T, Lamanda AC, Sin ML, Gau V, Liao JC, Wong PK. J Lab Autom. 2014 Dec 8

Hedgehog signaling restrains bladder cancer progression by eliciting stromal production of urothelial differentiation factors. Shin K, Lim A, Zhao C, Sahoo D, Pan Y, Spiekerkoetter E, Liao JC, Beachy PA. Cancer Cell. 2014, 26(4): 521-533

Confocal laser endomicroscopy of bladder and upper tract urothelial carcinoma: a new era of optical diagnosis? Chen SP, Liao JC. Curr Urol Rep. 2014, 15(9): 437

Endoscopic molecular imaging of human bladder cancer using a CD47 antibody. Pan Y, Volkmer JP, Mach KE, Rouse RV, Liu JJ, Sahoo D, Chang TC, Metzner TJ, Kang L, van de Rijn M, Skinner EC, Gambhir SS, Weissman IL, Liao JC.  Sci Transl Med. 2014, 6(260):260ra148. doi: 10.1126/scitranslmed.3009457.

Emerging endoscopic imaging technologies for bladder cancer  detection. Lopez A, Liao JC. Current Urology Reports, 2014, 15(5):406.
Three-dimensional, distendable bladder phantom for optical coherence tomography and white light cystoscopy. Lurie KL, Smith GT, Khan SA, Liao JC, Ellerbee AK. Journal of Biomedical Optics, 2014, 19(3):36009.
Electrokinetic stringency control in self-assembled monolayer-based biosensors for multiplex urinary tract infection diagnosis. Liu T, Sin ML, Pyne JD, Gau V, Liao JC, Wong PK. Nanomedicine, 2014, 10(1): 159-66.
Advances and challenges in biosensor-based diagnosis of infectious diseases. Sin MLY, Mach KE, Wong PK, Liao JC. Expert Review of Molecular Diagnostics, 2014, 1-20.
Intraoperative optical imaging and tissue interrogation during urologic surgery. Hsu M, Gupta M, Su LM, Liao JC. Current Opinion in Urology, 2014, 24(1) 66-74.

A universal electrode approach for automated electrochemical molecular analysis. Sin ML, Gau V, Liao JC, Wong PK. J Microelectromech Syst. 2013, 22(5): 1126-1132

A Cell Phone-Based Microphotometric System for Rapid Antimicrobial Susceptibility Testing. Kadlec MW, You D, Liao JC, Wong PK. Journal of Laboratory Automation. 2013, May 22.
Turning on the Lights: New Technologies in Optical Diagnostics and Therapeutics. Liao JC, Leppert JT. Journal of Urology, 2013, 190(2): 381-2.
An AC electrokinetics facilitated biosensor cassette for rapid pathogen identification. Ouyang M, Mohan R, Lu Y, Liu T, Mach KE, Sin ML, McComb M, Joshi J, Gau V, Wong PK, Liao JC. Analyst, 2013, 138(13): 3660-6.
Single Cell antimicrobial susceptibility testing by confined microchannels and electrokinetic loading. Lu Y, Gao J, Zhang DD, Gau V, Liao JC, Wong PK. Analytical Chemistry, 2013, 85(8): 3971-6.
Probe-based Confocal Laser Endomicroscopy of the Urinary Tract: The Technique. Chang TC, Lui JJ, Liao JC. Journal of Visualized Experiments, 2013, Jan 10(71): e4409.
Interobserver Agreement of Confocal Laser Endomicroscopy for Bladder Cancer. Chang TC, Liu JJ, Hsiao ST, Pan Y, Mach KE, Leppert JT, McKenney JK, Rouse RV, Liao JC. Journal of Endourology, 2013, 27(5): 598-603.

New optical imaging technologies for bladder cancer: considerations and perspectives. Liu JJ, Droller MJ, Liao JC. Journal of Urology, 2012, 188(2): 361-8.

Rapid hybridization of nucleic acids using isotachophoresis. Bercovici M, Han CM, Liao JC, Santiago JG. Proceedings of the National Academy of Sciences USA, 2012, 109(28):11127-32.

Endoscopic imaging of Cerenkov luminescence. Kothapalli SR, Liu H, Liao JC, Cheng Z, Gambhir SS. Biomedical Optics Express. 2012, 3(6):1215-25.

In Situ Electrokinetic Enhancement for Self-Assembled-Monolayer-Based Electrochemical Biosensing. Sin ML, Liu T, Pyne JD, Gau V, Liao JC, Wong PK. Analytical Chemistry, 84(6): 2702-7 2012.

Seeing it through: translational validation of new medical imaging modalities. Aldrich MB, Marshall MV, Sevick-Muraca EM, Lanza G, Kotyk J, Culver J, Wang LV, Uddin J, Crews BC,3 Marnett LJ, Liao JC, Contag C, Crawford JM, Wang K, Reisdorph B, Appelman H, Turgeon DK, Meyer C, Wang T. Biomedical Optics Express, 2012, 3(4): 764-776.
Clinical Validation of Integrated Nucleic Acid and Protein Detection on an Electrochemical Biosensor Array for Urinary Tract Infection Diagnosis. Mohan R, Mach KE, Bercovici M, Pan Y, Dhulipala L, Wong PK, Liao JC, PLoS ONE, 2011, 6(10) e26846.
Dynamic Real-time Microscopy of the Urinary Tract Using Confocal Laser Endomicroscopy. Wu K, Liu J, Adams W, Sonn GA, Mach KE, Pan Y, Beck AH, Jensen KC, Liao JC, Urology, 2011, 78(1): 225-31.
Molecular detection of bacterial pathogens using microparticle enhanced double-stranded DNA probes. Riahi R, Mach KE, Mohan R, Liao JC, Wong PK. Analytical Chemistry, 2011, 83(16): 6349-6354.
Comparison of 2.6- and 1.4-mm Imaging Probes for Confocal Laser Endomicroscopy of the Urinary Tract. Adams W, Wu K, Liu J, Hsiao ST, Jensen KC, Liao JC. Journal of Endourology, 2011, 25(6): 917-21.
Rapid Detection of Urinary Tract Infections Using Isotachophoresis and Molecular Beacons. Bercovici M., Kaigala GV, Mach KE, Han CM, Liao JC, and Santiago JG. Analytical Chemistry, 2011, 83(11): 4110-7.
Hybrid electrokinetic manipulation in high-conductivity media, Gao J, Sin M, Liu T, Gau V, Liao JC, and Wong PK. Lab on a Chip, 2011, 11(10): 1770-5.
Biosensor diagnosis of urinary tract infections: a path to better treatment? Mach KE, Wong PK, Liao JC. Trends in Parmacological Sciences, 2011, 32 (6):330-336.
A biosensor platform for rapid antimicrobial susceptibility testing directly from clinical samples. Mach KE, Mohan R, Baron EJ, Shih MC, Gau V, Wong PK, Liao JC. Journal of Urology, 2011, 185(1): 148-153.
Antimicrobial Susceptibility Testing Using High Surface-to-Volume Ratio Microchannels. Chen CH, Lu Y, Sin ML, Mach KE, Zhang DD, Gau V, Liao JC, Wong PK. Analytical Chemistry, 2010, 82(3): 1012-9.
Matrix-insensitive protein assays push the limits of biosensors in medicine. Gaster RS, Hall DA, Nielsen CH, Osterfeld SJ, Yu H, Mach KE, Wilson RJ, Murmann B, Liao JC, Gambhir SS, Wang SX. Nature Medicine, 2009, 15 (11): 1327-32. 
Multiplex pathogen identification for polymicrobial urinary tract infections using biosensor technology: a prospective clinical study. Mach KE, Du CB, Phull H, Haake DA, Shih MC, Baron EJ, Liao JC. Journal of Urology, 2009, 182 (6): 2735-41.
Optical biopsy of human bladder neoplasia with in vivo confocal laser endomicroscopy. Sonn GA, Jones SN, Tarin TV, Du CB, Mach KE, Jensen KC, Liao JC. Journal of Urology, 2009, 182(4): 1299-305.
Fibered confocal microscopy of bladder tumors: an ex vivo study. Sonn GA, Mach KE, Jensen K, Hsiung PL, Jones SN, Contag CH, Wang TD, Liao JC., Journal of Endourology, 2009, 23(2): 197-201.