In order to install Clench2 as a web-based application put the Clench_plugin.pl
script in folder that is in the system PATH on a webserver.

Copy the scripts from the cgi-bin-scripts folder into your web-server's cgi-bin
and copy the RunClench.html into your htdocs directory.

Edit the $tmpdir in RunClenchWeb.pl script (line 12) to a suitable directory and
make sure Clench_plugin.pl has write permissions to that directory.

Make sure that the Clench_Organism.conf file and all the files required by the 
conf file are available and have their full paths declared in the .conf file. The
conf file should be in the same directory as the Clench_plugin.pl script

Make sure all the prerequisites listed in Prerequisits.txt are satisfied on the 
server.

Navigate to the <your-website>/RunClench.html page and you are all set!