Meta-Research
Research that concerns scientific practice itself, including everything from scientific integrity to research methodology.
Ayorech, Z., Selzman, S., Smith-Woolley, E., Knopik, V., Neiderhiser, J., DeFries, J., Plomin, R. (2016). Publication Trends Over 55 Years of Behavioral Genetic Research. Behavior Genetics, 46, (5), 603-607.
Azoulay, P., Furman, J. L., Krieger, J. L., & Murray, F. (2014). Retractions. Review of Economics and Statistics, (0).
Baerlocher, M. O., O’Brien, J., Newton, M., Gautam, T., & Noble, J. (2010). Data integrity, reliability and fraud in medical research. European Journal of Internal Medicine, 21(1), 40-45.
Baker, J. P. (2003). The pertussis vaccine controversy in Great Britain, 1974–1986. Vaccine, 21(25), 4003-4010.
Ballietti, S., Goldstone, R., Helbing, D. (2016). Peer Review and Competition in the Art Exhibition Game. National Academy of Sciences. , 113, (30), 8414-8419.
Bandyopadhyay, P., Bennett, J., Higgs, M. (2014). How to Undermine Underdetermination? Foundation of Science , 20, (2), 107-127.
Banglawala, S. M., Lawrence, L. A., Franko-Tobin, E., Soler, Z. M., Schlosser, R. J., & Ioannidis, J. (2014). Recent Randomized Controlled Trials in Otolaryngology. Otolaryngology–Head and Neck Surgery, 0194599814563518.
Baribault, B., Donkin, C., Little, D., Trueblood, J. Oravecz, Z., Ravenzwaaij, D. (2018). National Academy of Sciences
Baumgardner, M. H., Greenwald, A. G., Leippe, M. R., Pratkanis, A. R. (1986).
Under What Conditions Does Theory Obstruct Research Progress?Psychological Review , 93,(2), 216-229.
Beginning, O. (2004). Managing allegations of scientific misconduct and fraud: lessons from the “Hall affair”. The Medical Journal of Australia, 180(4), 149-151.
Begley, C.G., Ioannidis, J.P. (2015). Reproducibility in Science: Improving the Standard for Basic and Preclinical Research American Heart Association , 116, (1), 116-126.
Benjamin, D.J., Berger, J.O., Johannesson, M., Nosek, B.A., Wagenmakers, E.-J., Berk, R… Johnson, V.E. (2018). Redefine Statistical SignificanceNature Human Behaviour , 2, 6-10.
Bes-Rastrollo, M., Schulze, M.B., Ruiz-Canela, M., Martinez-Gonzalez, M.A. (2013). Financial conflicts of interest and reporting bias regarding the association between sugar-sweetened beverages and weight gain: A systematic review of systematic reviews. PLoS Medicine, 10(12), doi: 10.1371/journal.pmed.1001578.
Bless, H., Burger, A.M. (2016). A Closer Look at Social Psychologists’ Silver Bullet: Inevitable and Evitable Side Effects of the Experimental Approach. Perspectives on Psychological Science , 11,(2), 296-308.
Bonetta, L. (2006). The aftermath of scientific fraud. Cell, 124(5), 873-875.
Braxton, J. M., & Bayer, A. E. (1996). Personal experiences of research misconduct and the response of individual academic scientists. Science, Technology & Human values, 21(2), 198-213.
Brown, A. W., Ioannidis, J. P., Cope, M. B., Bier, D. M., & Allison, D. B. (2014). Unscientific Beliefs about Scientific Topics in Nutrition. Advances in Nutrition: An International Review Journal, 5(5), 563-565.
Budd, J. M., Sievert, M., Schultz, T. R., & Scoville, C. (1999). Effects of article retraction on citation and practice in medicine. Bulletin of the Medical Library Association, 87(4), 437.
Button, K.S., Ioannidis, J.P., Mokrysz, C., Nosek, B.A., Flint, J., Robinson, E.S., Munafo, M.R. (2013). Power Failure: why small sample size undermines the reliability of neuroscience. Nature Reviews Neuroscience , 14, 365-376.
Callaham, M. L., Wears, R. L., Weber, E. J., Barton, C., & Young, G. (1998). Positive-outcome bias and other limitations in the outcome of research abstracts submitted to a scientific meeting. JAMA, 280(3), 254-257.
Causadias, J. M., Vitriol, J. A., & Atkin, A. L. (2018). Do we overemphasize the role of culture in the behavior of racial/ethnic minorities? Evidence of a cultural (mis)attribution bias in American psychology. American Psychologist, 73,(3), 243-255.
Chalmers, I., & Dickersin, K. (2013). Biased under-reporting of research reflects biased under-submission more than biased editorial rejection. F1000Research, 2.
Chandler, J., Paolacci, G., Peer, E., Mueller, P., Ratliff, K. A. (2015). Using Nonnaive Participants Can Reduce Effect Sizes. Psychological Science, 26,(7), 1131-1139.
Chavalarias, D., Wallach, J. D., Li, A. H., Ioannidis, J. P. (2016). Evolution of Reporting P Values in the Biomedical Literature, 1990-2015. JAMA , 315,(11), 1141-1148.
Chen, R., Desai, N. R., Ross, J.S., Zhang W., Chau, K. H., Wayda, B… Krumholz, H. M. (2016). Publication and reporting of clinical trial results: cross sectional analysis across academic medical centers. BMJ , 352,(637).
Christie, B. (1999). Panel needed to combat research fraud. BMJ: British Medical Journal, 319(7219), 1222.
Clark, S. E., Moreland, M. B., & Gronlund, S. D. (2014). Evolution of the empirical and theoretical foundations of eyewitness identification reform. target=”_blank”Psychonomic Bulletin & Review, 21(2), 251-267.
Clauset, A., Larremore, D. B., Sinatra, R. (2017). Data-driven predictions in the science of science. Science , 355,(6324), 477-480.
Colombo, M., Bucher, L., Inbar, Y. (2016). Explanatory Judgment, Moral Offense and Value-Free Science. Review of Philosophy and Psychology , 7,(4), 743-763.
Colquhoun, D. (2014). An investigation of the false discovery rate and the misinterpretation of p-values. R. Soc. open. Sci., 1,(140216).
Cohen-Kohler, J. C., & Esmail, L. C. (2007). Scientific misconduct, the pharmaceutical industry, and the tragedy of institutions. Medicine and Law, 26(3), 431.
Cokol, M., Iossifov, I., Rodriguez‐Esteban, R., & Rzhetsky, A. (2007). How many scientific papers should be retracted?. EMBO Reports, 8(5), 422-423.
Consoli, L. (2006). Scientific misconduct and science ethics: a case study based approach. Science and Engineering Ethics, 12(3), 533-541.
Cook, D. J., Guyatt, G. H., Ryan, G., Clifton, J., Buckingham, L., Willan, A., … & Oxman, A. D. (1993). Should unpublished data be included in meta-analyses?: Current convictions and controversies. JAMA, 269(21), 2749-2753.
Cooper, H., & Dent, A. (2011). Ethical issues in the conduct and reporting of meta-analysis. In A. T. Panter, & S. K. Sterba (Eds.), Handbook of ethics in quantitative methodology; handbook of ethics in quantitative methodology (pp. 417-443, Chapter xix, 519 Pages) Routledge/Taylor & Francis Group, New York, NY.
Coyne, J. C. (2016). Replication initiatives will not salvage the trustworthiness of psychology. BMC Psychology, 4,(28), 1-19.
Cunningham, M. R., Baumeister, R. F. (2016). How to Make Nothing Out of Something: Analyses of the Impact of Study Sampling and Statistical Interpretation in Misleading Meta-Analytic Conclusions. Frontiers in Psychology, 7,(1639).
Dahlberg, J. E., & Mahler, C. C. (2006). The Poehlman case: running away from the truth. Science and Engineering Ethics, 12(1), 157-173.
Dalton, R. (2001). Private investigations. Nature, 411(6834), 129-130.
David, S. P., Ware, J. J., Chu, I. M., Loftus, P. D., Fusar-Poli, P., Radua, J… Ioannidis, J. P. (2013). Potential Reporting Bias in fMRI Studies of the Brain. PLoS ONE , 8,(7), e70104.
Davis, P. M. (2012). The persistence of error: a study of retracted articles on the Internet and in personal libraries. Journal of the Medical Library Association: JMLA, 100(3), 184.
Dijksterhuis, A. (2014). Welcome Back Theory! Perspectives on Psychological Science, 9(1), 72-75.
Dreber, A., Pfeiffer, T., Almenberg, J., Isaksson, S., Wilson, B., Chen, Y… Johannesson, M. (2015). Using prediction markets to estimate the reproducibility of scientific research. PNAS , 112,(50), 15343-15347.
Dyer, C. (1998). Doctor admits research fraud. BMJ, 316(7132), 645.
Dyer, O. (2003). GMC reprimands doctor for research fraud. BMJ: British Medical Journal, 326(7392), 730.
Earp, B. D., Trafimow, D. (2015). Replication, falsification, and the crisis of confidence in social psychology. Front. Psychol. , 6,(621).
Earp, B. D. (2016). Open review of the draft paper entitled, “Replication initiatives will not salvage the trustworthiness of psychology” by James C. Coyne. BMC Psychology .
Ebrahim, S., Sohani, Z. N., Montoya, L., Agarwal, A., Thorlund, K., Mills, E. J., & Ioannidis, J. P. (2014). Reanalyses of randomized clinical trial data. JAMA, 312(10), 1024-1032.
Enders, W., & Hoover, G.A. (2004). Whose line is it? Plagiarism in economics. Journal of Economic Literature, 42, 487-493.
Enders, W., & Hoover, G. (2006). Plagiarism in the economics profession: A survey. Challenge, 49(5), 92-107.
Epstein, W. M. (2004). Confirmational Response Bias and the Quality of the Editorial Processes Among American Social Work Journals. Sage Publications , 14,(6), 450-458.
Etz, A., Vandekerckhove, J. (2016). A Bayesian Perspective on the Reproducibility Project: Psychology. PLoS ONE , 11,(2), e0149794.
Fair, J. E. (1988). A meta-research case study of developmental journalism. Journalism Quarterly, 65(1), 165.
Fanelli, D., Costas, R., Lariviere, V. (2015). Misconduct Policies, Academic Culture and Career Stage, Not Gender or Pressures to Publish, Affect Scientific Integrity. PLoS ONE , 10,(6), e0127556.
Fanelli, D., Costas, R., Ioannidis, J. P. (2017). Meta-assessment of bias in science. PNAS , 114,(14), 3714-3719.
Fanelli, D. (2009). How many scientists fabricate and falsify research? A systematic review and meta-analysis of survey data. PloS One, 4(5), e5738.
Fanelli, D. (2013). Why growing retractions are (mostly) a good sign. PLoS Medicine, 10(12), e1001563.
Fang, F. C., Bennett, J. W., & Casadevall, A. (2013). Males are overrepresented among life science researchers committing scientific misconduct. MBio, 4(1), e00640-12.
Fang, F. C., & Casadevall, A. (2011). Retracted science and the retraction index. Infection and Immunity, 79(10), 3855-3859.
Fiore, S. M. (2016). SciTS 101: Fundamentals of the Science of Team Science. Conference Workshop.
Flaherty, D. K. (2011). The vaccine-autism connection: a public health crisis caused by unethical medical practices and fraudulent science. Annals of Pharmacotherapy, 45(10), 1302-1304.
Fortunato, S., Bergstrom, C. T., Börner, K., Evans, J. A., Helbing, D., Milojevié, S… Barabási, A. L. (2018). Science of science. Science, 359.
Frances, G. (2011). Follow the argument where it leads: Simonsohn’s criticisms on publication bias critiques are unfounded. Department of Psychological Sciences.
Francis, G. (2014). The frequency of excess success for articles in Psychological Science. Psychonomic Bulletin & Review, 21(5), 1180-1187.
Franco, A., Malhotra, N., Simonovits, G. (2016). Underreporting in Psychology Experiments: Evidence From a Study Registry. Social Psychology and Personality Science , 7,(1), 8-12.
Freedman, L.P., Cockburn, I.M., & Simcoe, T.S. (2015). The Economics of Reproducibility in Preclinical Research. PLoS Biology, 13(6), 1-9.
Freedman, L. P., Cockburn, I. M., Simcoe, T. S. (2015). The Economics of Reproducibility in Preclinical Research. PLoS Biol , 13,(6), e1002165.
Fuchs, H. M., Jenny, M., & Fiedler, S. (2012). Psychologists are open to change, yet wary of rules. Perspectives on Psychological Science, 7(6), 639-642.
Furman, J. L., Jensen, K., & Murray, F. (2012). Governing knowledge in the scientific community: Exploring the role of retractions in biomedicine. Research Policy, 41(2), 276-290.
Fusar‐Poli, P., Radua, J., Frascarelli, M., Mechelli, A., Borgwardt, S., Fabio, F., … & David, S. P. (2014). Evidence of reporting biases in voxel‐based morphometry (VBM) studies of psychiatric and neurological disorders. Human Brain Mapping, 35(7), 3052-3065.
Gall, T., Ioannidis, J. P., Maniadis, Z. (2017). The credibility crisis in research: Can economics tools help? PLoS Biol , 15,(4), e2001846.
Gardner, W., Lidz, C. W., & Hartwig, K. C. (2005). Authors’ reports about research integrity problems in clinical trials. Contemporary Clinical Trials, 26(2), 244-251.
Gelman, A., & Basbøll, T. (2014). When do stories work? Evidence and illustration in the social sciences. Sociological Methods & Research, 0049124114526377.
Gibelman, M., & Gelman, S. R. (2005). Scientific misconduct in social welfare research: Preventive lessons from other fields. Social Work Education, 24(3), 275-295.
Gilbert, D. T., King, G., Pettigrew, S., Wilson, T. D. (2016). Comment on “Estimating the reproducibility of psychological science.” Science , 351,(6277), 1037.
Godau, C., Vogelgesang, T., Gaschler, R. (2016). Perception of bar graphs e A biased impression? Elsevier , 359, 67-73.
Gottweis, H., & Triendl, R. (2006). South Korean policy failure and the Hwang debacle. Nature Biotechnology, 24(2), 141-143.
Gregg, A. P., Mahadevan, N., Sedikides, C. (2016). The SPOT Effect: People Spontaneously Prefer their Own Theories. The Quarterly Journal of Experimental Psychology , 70,(6), 996-1010.
Greitemeyer, T. (2014). Article retracted, but the message lives on. Psychonomic Bulletin & Review , 21,(2), 557-561.
Grieneisen, M. L., & Zhang, M. (2012). A comprehensive survey of retracted articles from the scholarly literature. PLoS One, 7(10), e44118.
Guay, B., Davis, Z., DeLaunay, M., Charlesworth, A. (2014). Number Comprehension Impacts Political Judgments. Unpublished Draft.
Guernsey, L. (2014). Garbled in Translation: Getting Media Research to the Press and Public. Journal of Children and Media, 8(1), 87-94.
Gupta, A. (2013). Fraud and misconduct in clinical research: A concern. Perspectives in Clinical Research, 4(2), 144.
Gupta, N., & Stopfer, M. (2011). Negative results need airing too. Nature, 470(7332), 39-39.
Haidich, A. B., Pilalas, D., Contopoulos-Ioannidis, D. G., & Ioannidis, J. P. (2013). Most meta-analyses of drug interventions have narrow scopes and many focus on specific agents. Journal of Clinical Epidemiology, 66(4), 371-378.
Harriman, S. L., Patel, J. (2016). When are clinical trials registered? An analysis of prospective versus retrospective registration. Trials, 17,(187).
Healy, N. D. B. (1990). HHS: Gallo guilty of misconduct. Science, 22, 1499.
Heeren, A., Mogoașe, C., Philippot, P., & McNally, R. J. (2015). Attention bias modification for social anxiety: A systematic review and meta-analysis. Clinical Psychology Review, 40, 76-90.
Hicks, D., Wouters, P., Waltman, L., Rijcke, S., Rafols, I. (2015). The Leiden Manifesto for research metrics. Macmillan Publishers Limited , 520, 429-431.
Holman, L., Head, M. L., Lanfear, R., Jennions, M. D. (2015). Evidence of Experimental Bias in the Life Sciences: Why We Need Blind Data Recording. PLoS Biol , 13,(7), e1002190.
Hopkins, E. J., Weisberg, D. S., Taylor, J. C. (2016). The seductive allure is a reductive allure: People prefer scientific explanations that contain logically irrelevant reductive information. Elsevier , 155, 67-76.
Howard, D. H., David, G., Hockenberry, J. (2016). Selective Hearing: Physician-Ownership and Physicians’ Response to New Evidence. Nber Working Paper Series .
Hunter, J. P., Saratzis, A., Sutton, A. J., Boucher, R. H., Sayers, R. D., & Bown, M. J. (2014). In meta-analyses of proportion studies, funnel plots were found to be an inaccurate method of assessing publication bias. Journal of Clinical Epidemiology, 67(8), 897-903.
Ioannidis, J. P. (2015). A generalized view of self-citation: Direct, co-author, collaborative, and coercive induced self-citation. Journal of Psychosomatic Research, 78(1), 7-11.
Ioannidis, J. P. (2011). Excess significance bias in the literature on brain volume abnormalities. Archives of General Psychiatry, 68(8), 773-780.
Ioannidis, J. P. (2013). Implausible results in human nutrition research. BMJ, 347.
Ioannidis, J. P. (2013). Informed consent, big data, and the oxymoron of research that is not research. The American Journal of Bioethics, 13(4), 40-42.
Ioannidis, J. P. (2013). To Replicate or Not to Replicate: The Case of Pharmacogenetic Studies Have Pharmacogenomics Failed, or Do They Just Need Larger-Scale Evidence and More Replication?. Circulation: Cardiovascular Genetics, 6(4), 413-418.
Ioannidis, J. P. (2008). Why most discovered true associations are inflated. Epidemiology, 19(5), 640-648.
Ioannidis J.P.A. (2005). Why most published research findings are false. PLoS Med 2(8): e124.
Ioannidis, J.P.A. (2012). Why science is not necessarily self-correcting. Perspectives on Psychological Science, 7, 645-654.
Ioannidis, JPA., Fanelli, D., Dunne, D. D., Goodman, S. N. (2015). Meta-research: Evaluation and Improvement of Research Methods and Practices. PLoS Biol, 13, (10), e10002264.
Ioannidis, J. P., Khoury, M. J.(2014). Assessing Value in Biomedical Research: The PQRST of Appraisal and Reward. JAMA , 312, (5), 483-484.
Ioannidis, J. P., Tarone, R., McLaughlin, J. K. (2011). The False-positive to False-negative Ratio in Epidemiologic Studies. Lippincott Williams & Wilkins , 22, (4), 450-456.
Ioannidis, J. P., Munafo, M. R., Fusar-Poli, P., Nosek, B. A., David, S. P. (2014). Publication and other reporting biases in cognitive sciences: detection, prevalence and prevention. Trends Cogn Sci. , Author Manuscript.
Ioannidis, J. P. (2012). Why Science Is Not Necessarily Self-Correcting. Perspectives on Psychological Science , 7, (6), 645-654.
Iqbal, S. A., Wallach, J. D., Khoury, M. J., Schully, S. D., Ioannidis, J. P. (2016). Reproducible Research Practices and
Transparency across the Biomedical
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Johnson, V. E., Payne, R., Wang, T., Asher, A., Mandal, S. (2017). On the reproducibility of psychological science. American Statistical Association , 112, (517), 1-10.
John, L. K., Loewenstein, G., & Prelec, D. (2012). Measuring the prevalence of questionable research practices with incentives for truth telling. Psychological Science, 0956797611430953.
Kahan, D. M., Peters, E., Dawson, E., Slovic, P. (2017). Motivated Numeracy and Enlightened Self-Government. Behavioural Public Policy , 1, (1), 54-86.
Kaiser, J. (2015). The Cancer Test: A nonprofit’s effort to replicate 50 top cancer papers is shaking up labs. AAAS , 348, (6242), 1411-1413.
Kandela, I., Aird, F. (2017). Replication Study: Discovery and preclinical validation of drug indications using compendia of public gene expression data. eLife , 6.
Kao, S.F., Wasserman, E. (1993). Assessment of an Information Integretation Account of Contingency Judgment With Examination of Subjective Cell Importance and Method of Information Presentation. Journal of Experimental Psychology: Learning, Memory, and Cognition , 19, 1363-1386.
Kaplan, R. M., Irvin, V. L. (2015). Likelihood of Null Effects of Large NHLBI Clinical Trials Has Increased over Time. PLoS ONE , 10, (8), e0132382.
Kassin, S. M., Ellsworth, P. C., Smith, V. L. (1989). The “General Acceptance” of Psychological Research on Eyewitness Testimony. American Psychologist , 44, (8), 1089-1098.
Kintisch, E. (2005). Scientific misconduct. Researcher faces prison for fraud in NIH grant applications and papers. Science, 307(5717), 1851-1851.
Klein, O., Doyen, S., Leys, C., Miller, S., Questienne, L., & Cleeremans, A. (2012). Low hopes, high expectations expectancy effects and the replicability of behavioral experiments. Perspectives on Psychological Science, 7(6), 572-584.
Ke, Q., Ferrara, E., Radicchi, F., Flammini, A. (2015). Defining and identifying Sleeping Beauties in science. PNAS , 112, (24), 7426-7431.
Khamis, A. M., Moheb, M. E., Nicolas, J., Iskandarani, G., Refaat, M. M., & Akl, E. A. (2019). Several reasons explained the variation in the results of 22 meta-analyses addressing the same question. Journal of Clinical Epidemiology, 113, 147-158.
Klien, M., Broadwell, P., Farb, S., Grappone, T. (2016). Comparing Published Scientific Journal Articles to Their Pre-print Versions. JCDL .
Kornbrot, D. E., Wiseman, R., Georgiou, G. J. (2018). Quality science from quality measurement: The role of measurement type with respect to replication and effect size magnitude in psychological research. PLoS ONE , 13, (2), e0192808.
Korpela, K. M. (2010). How long does it take for the scientific literature to purge itself of fraudulent material?: the Breuning case revisited. Current Medical Research & Opinion, 26(4), 843-847.
Kranke, P. (2005). Review of publication bias in studies on publication bias: Meta-research on publication bias does not help transfer research results to patient care. BMJ : British Medical Journal, 331(7517), 638.
Kuklinski, J. H., Quirk, P. J., Jerit, J., Schweider, D., Rich, R. (2018). Misinformation and the Currency of Democratic Citizenship. The Journal of Politics , 62, (3), 790-816.
Kurzman, C., Schanzer, D., Moosa, E. (2011). Muslim American Terrorism Since 9/11: Why So Rare? The Muslim World , 101, (3), 464-483.
Kurzban, R. (2010). Does the Brain Consume Additional Glucose During Self-Control Tasks? Evolutionary Psychology , 8,(2), 244-259.
Kyzas, P. A., Loizou, K. T., & Ioannidis, J. P. (2005). Selective reporting biases in cancer prognostic factor studies. Journal of the National Cancer Institute, 97(14), 1043-1055.
Lakes, D. (2014). Why Psychologists Should Ignore Recommendations to Use α < .001. The 20% Statistician .
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