In press


Belisle M, Mendenhall CD, Oviedo Brenes F, and Fukami T (published online) Temporal variation in fungal communities associated with tropical hummingbirds and nectarivorous bats. Fungal Ecology PDF

Callahan BJ, Fukami T, and Fisher DS (published online) Rapid evolution of adaptive niche construction in experimental microbial populations. Evolution PDF

Fukami T (accepted) Historical contingency in community assembly: integrating niches, species pools, and priority effects. Annual Review of Ecology, Evolution, and Systematics

Leopold DR, Tanentzap AJ, Lee WG, Heenan PB, and Fukami T (accepted) Evolutionary priority effects in New Zealand alpine plants across environmental gradients. Journal of Biogeography

2014


Good AP, Gauthier M-PL, Vannette RL, and Fukami T (2014) Honey bees avoid nectar colonized by three bacterial species, but not by a yeast species, isolated from the bee gut. PLoS ONE 9: e86494. Open access
Moeller HV, Peay KG, and Fukami T (2014) Ectomycorrhizal fungal traits reflect environmental conditions along a coastal California edaphic gradient. FEMS Microbiology Ecology 87: 797-806. PDF
Tucker CM and Fukami T (2014) Environmental variability counteracts priority effects to facilitate species coexistence: evidence from nectar microbes. Proceedings of the Royal Society B: Biological Sciences 281: 20132637. PDF

Vannette RL and Fukami T (2014) Historical contingency in species interactions: towards niche-based predictions. Ecology Letters 17: 115-124. Open access

2013


Brownell SE, Kloser MJ, Fukami T, and Shavelson RJ (2013) Context matters: volunteer bias, small sample size, and the value of comparison groups in the assessment of research-based undergraduate introductory biology lab courses. Journal of Microbiology and Biology Education 14: 176-182. PDF

Fukami T (2013) Integrating inquiry-based teaching with faculty research. Science 339: 1536-1537. PDF Fukami T, Bellingham PJ, Peltzer DA, and Walker LR (2013) Non-native plants disrupt dual promotion of native alpha and beta diversity. Folia Geobotanica 48: 319-333. PDF Fukami T and Nakajima M (2013) Complex plant-soil interactions enhance plant species diversity by delaying community convergence. Journal of Ecology 101: 316-324. PDF

Kloser MJ, Brownell SE, Shavelson RJ, and Fukami T (2013) Effects of a research-based ecology lab course: a study of non-volunteer achievement, self-confidence and perception of lab course purpose. Journal of College Science Teaching 42: 90-99. PDF

McFall-Ngai M, Hadfield M, Bosch T, Carey H, Domazet-Loso T, Douglas A, Dubilier N, Eberl G, Fukami T, Gilbert S, Hentschel T, King N, Kjelleberg S, Knoll AH, Kremer N, Mazmanian S, Metcalf J, Nealson K, Pierce N, Rawls J, Reid A, Ruby E, Rumpho M, Sanders J, Tautz D, and Wernegreen J (2013) Animals in a bacterial world, an imperative for the life sciences. Proceedings of the National Academy of Sciences 110: 3229-3236. PDF

Nemergut DR, Schmidt SK, Fukami T, O'Neill SP, Bilinski TM, Stanish LF, Knelman JE, Darcy JL, Lynch RC, Wickey P, and Ferrenberg S (2013) Patterns and processes of microbial community assembly. Microbiology and Molecular Biology Reviews 77: 342-356. PDF Peay KG, Dickie IA, Wardle DA, Bellingham PJ, and Fukami T (2013) Rat invasion of islands alters fungal community structure, but not wood decomposition rates. Oikos 122: 258-264. PDF

Suding KN, Harpole WS, Fukami T, Kulmatiski A, MacDougall AS, Stein C, and Van der Putten WH (2013) Consequences of plant-soil feedbacks in invasion. Journal of Ecology 101: 298-308. PDF

Van der Putten WH, Bardgett RD, Bever JD, Bezemer TM, Casper BB, Fukami T, Kardol P, Klironomos JN, Kulmatiski A, Schweitzer JA, Suding KN, Van der Voorde TFJ, and Wardle DA (2013) Plant-soil feedback: the past, the present and future challenges. Journal of Ecology 101: 265-276. PDF

Vannette RL, Gauthier M-PL, and Fukami T (2013) Nectar bacteria, but not yeast, weaken a plant-pollinator mutualism. Proceedings of the Royal Society B: Biological Sciences 280: 20122601. PDF

2012


Belisle M, Peay KG, and Fukami T (2012) Flowers as islands: spatial distribution of nectar-inhabiting microfungi among plants of Mimulus aurantiacus, a hummingbird-pollinated shrub. Microbial Ecology 63: 711-718. PDF

Brownell SE, Kloser MJ, Fukami T, and Shavelson RJ (2012) Undergraduate biology lab courses: comparing the impact of traditionally-based "cookbook" and authentic research-based courses on student lab experiences. Journal of College Science Teaching 41: 36-45. PDF Dickie IA, Fukami T, Wilkie JP, Allen RB, and Buchanan PK (2012) Do assembly history effects attenuate from species to ecosystem properties? A field test with wood-inhabiting fungi. Ecology Letters 15: 133-141. PDF

Knope ML, Forde SE, and Fukami T (2012) Evolutionary history, immigration history, and the extent of diversification in community assembly. Frontiers in Microbiology 2: 273. Link

Knope ML, Morden CW, Funk VA, and Fukami T (2012) Area and the rapid radiation of Hawaiian Bidens (Asteraceae). Journal of Biogeography 39: 1206-1216. PDF

Lynch HB, Epps KY, Fukami T, and Vitousek PM (2012) Introduced canopy tree species effect on the soil microbial community in a montane tropical forest. Pacific Science 66: 141-150. PDF

Peay KG, Belisle M, and Fukami T (2012) Phylogenetic relatedness predicts priority effects in nectar yeast communities. Proceedings of the Royal Society B: Biological Sciences 279: 749-758. PDF Wardle DA, Bellingham PJ, Fukami T, and Bonner KI (2012) Soil-mediated indirect impacts of an invasive predator on plant growth. Biology Letters 8: 574-577. PDF

2011


Fukami T and Nakajima M (2011) Community assembly: alternative stable states or alternative transient states? Ecology Letters 14: 973-984. PDF

Kloser MJ, Brownell SE, Chiariello NR, and Fukami T (2011) Integrating teaching and research in undergraduate biology laboratory education. PLoS Biology 9: e1001174. Link

Massol F, Gravel D, Mouquet N, Cadotte MW, Fukami T, and Leibold MA (2011) Linking community and ecosystem dynamics through spatial ecology. Ecology Letters 14: 313-323. PDF

2010


Fukami T, Dickie IA, Wilkie JP, Paulus BC, Park D, Roberts A, Buchanan PK, and Allen RB (2010) Assembly history dictates ecosystem functioning: evidence from wood decomposer communities. Ecology Letters 13: 675-684. PDF Fukami T (2010) Community assembly dynamics in space. Pages 45-54 in: Verhoef HA and Morin PJ (editors) Community Ecology: Processes, Models, and Applications. Oxford University Press. PDF

2009


Olito C and Fukami T (2009) Long-term effects of predator arrival timing on prey community succession. American Naturalist 173: 354-362. PDF

Mulder CPH, Grant-Hoffman MN, Towns DR, Bellingham PJ, Wardle DA, Durrett MS, Fukami T, and Bonner KI (2009) Direct and indirect effects of rats: does rat eradication restore ecosystem functioning of New Zealand seabird islands? Biological Invasions 11: 1671-1688. PDF

2007


Fukami T, Beaumont HJE, Zhang X-X, and Rainey PB (2007) Immigration history controls diversification in experimental adaptive radiation. Nature 446: 436-439. PDF Wardle DA, Bellingham PJ, Fukami T, and Mulder CPH (2007) Promotion of ecosystem carbon sequestration by invasive predators. Biology Letters 3: 479-482. PDF

2006


Fukami T, Wardle DA, Bellingham PJ, Mulder CPH, Towns DR, Yeates GW, Bonner KI, Durrett MS, Grant-Hoffman MN, and Williamson WM (2006) Above- and below-ground impacts of introduced predators in seabird-dominated island ecosystems. Ecology Letters 9: 1299-1307. PDF Fukami T and Lee WG (2006) Alternative stable states, trait dispersion, and ecological restoration. Oikos 113: 353-356. PDF

Cadotte MW, McMahon SM, and Fukami T (editors) (2006) Conceptual ecology and invasion biology: reciprocal approaches to nature. Springer. Link

2005


Fukami T, Bezemer TM, Mortimer SR, and Van der Putten WH (2005) Species divergence and trait convergence in experimental plant community assembly. Ecology Letters 8: 1283-1290. PDF Fukami T and Wardle DA (2005) Long-term ecological dynamics: reciprocal insights from natural and anthropogenic gradients. Proceedings of the Royal Society B: Biological Sciences 272: 2105-2115. PDF

Cadotte MW and Fukami T (2005) Dispersal, spatial scale, and species diversity in a hierarchically structured experimental landscape. Ecology Letters 8: 548-557. PDF

Fukami T (2005) Integrating internal and external dispersal in metacommunity assembly: preliminary theoretical analyses. Ecological Research 20: 623-631. PDF

2004


Fukami T (2004) Assembly history interacts with ecosystem size to influence species diversity. Ecology 85: 3234-3242. PDF

Fukami T (2004) Community assembly along a species pool gradient: implications for multiple-scale patterns of species diversity. Population Ecology 46: 137-147. PDF

2003


Fukami T and Morin PJ (2003) Productivity-biodiversity relationships depend on the history of community assembly. Nature 424: 423-426. PDF

2001


Fukami T, Naeem S, and Wardle DA (2001) On similarity among local communities in biodiversity experiments. Oikos 95: 340-348. PDF

Fukami T (2001) Sequence effects of disturbance on community structure. Oikos 92: 215-224. PDF

Book reviews


Fukami T (2010) Why a grand unified theory is neither feasible nor desirable. Science 330: 1049-1050. [Review of Loreau M (2010) From populations to ecosystems: theoretical foundations for a new ecological synthesis. Princeton University Press.] PDF

Fukami T (2010) Correcting Darwin's other mistake. Evolution 64: 3336-3338. [Review of Garland T Jr and Rose MR (editors) (2009) Experimental evolution: concepts, methods, and applications of selection experiments. University of California Press.] PDF