Publications

Graham S. Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R. Hoerner, Shannon M. White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte Brannon, Daniel A. Sumano, Raushun A. Kirtikar, Alicia A. Erwin, Thomas J. Metzner, Ryan K. C. Yuen, Alice C. Fan, John T. Leppert, Michael A. Eberle, Mark Gerstein, Michael P. Snyder (2022). Recurrent repeat expansions in human cancer genomes. In Nature.

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Gamze Gürsoy, Charlotte Brannon, Sarah Wagner, Mark Gerstein (2022). Storing and analyzing a genome on a blockchain. In Genome Biology.

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Gamze Gürsoy, Eduardo Chielle, Charlotte Brannon, Michail Maniatakos, Mark Gerstein (2022). Privacy-preserving genotype imputation with fully homomorphic encryption. In Cell Systems.

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Gamze Gürsoy, Tianxiao Li, Susanna Liu, Eric Ni, Charlotte Brannon, Mark Gerstein (2021). Functional genomics data: privacy risk assessment and technological mitigation. In Nat Rev Genet.

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Gamze Gürsoy, Prashant Emani, Charlotte Brannon, Otto A. Jolanki, Arif Harmanci, J. Seth Strattan, J. Michael Cherry, Andrew D. Miranker, Mark Gerstein (2020). Data Sanitization to Reduce Private Information Leakage from Functional Genomics. In Cell.

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Gamze Gürsoy, Charlotte Brannon, Fabio C P Navarro, Mark Gerstein (2020). FANCY: fast estimation of privacy risk in functional genomics data. In Bioinformatics.

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Gamze Gürsoy, Charlotte Brannon, Mark Gerstein (2020). Using Ethereum blockchain to store and query pharmacogenomics data via smart contracts. In BMC Med Genomics.

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Alma Dal Co, Charlotte Brannon, Martin Ackermann (2018). Metabolism: Division of labor in bacteria. In eLife.

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