| A B C D E F G H I J K L M N O P Q R S T U V W X Y Z | |
| objectStack — Property in class edu.stanford.covertlab.graphics.renderablerepeater.RenderableRepeater | |
| An Array of geometry objects that make up this repeater. | |
| offset(dX, dY) — Method in class flash.geom.Bezier | |
| Moves a curve on the prescribed distance on axes X and Y. | |
| offset(dX, dY) — Method in interface flash.geom.IParametric | |
| Move object at given distance by X Y | |
| offset(dX, dY) — Method in class flash.geom.Line | |
| Move line at given distance at axes X and Y. | |
| oldUserData — Property in class edu.stanford.covertlab.event.UserManagerEvent | |
| open() — Method in class edu.stanford.covertlab.chart.ChartWindow | |
| opening, closing | |
| open() — Method in class edu.stanford.covertlab.diagram.overview.Overview | |
| visibility of ovewview window | |
| open() — Method in class edu.stanford.covertlab.diagram.window.EditBiomoleculeStyleWindow | |
| opening, closing | |
| open() — Method in class edu.stanford.covertlab.diagram.window.EditBiomoleculeWindow | |
| opening, closing | |
| open() — Method in class edu.stanford.covertlab.diagram.window.EditCompartmentWindow | |
| opening, closing | |
| open() — Method in class edu.stanford.covertlab.diagram.window.FindBiomoleculeWindow | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.viewer.AboutWindow | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.ConfigureAxesWindow | |
| open, close | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.HeatmapWindow | |
| open, close | |
| open(database) — Method in class edu.stanford.covertlab.networkanalyzer.window.ImportNetworkWindow | |
| open(selectedExperimentId) — Method in class edu.stanford.covertlab.networkanalyzer.window.ManageExperimentsWindow | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.ManageNetworksWindow | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.NetworkPropertiesWindow | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.OpenNetworkWindow | |
| open, close window | |
| open() — Method in class edu.stanford.covertlab.networkanalyzer.window.SaveAsNetworkWindow | |
| open() — Method in class edu.stanford.covertlab.window.AboutWindow | |
| open() — Method in class edu.stanford.covertlab.window.HelpWindow | |
| open() — Method in class edu.stanford.covertlab.window.LogoffWindow | |
| open() — Method in class edu.stanford.covertlab.window.TutorialWindow | |
| open() — Method in class edu.stanford.covertlab.window.UserAccountWindow | |
| openEditWindow(event) — Method in class edu.stanford.covertlab.diagram.core.Biomolecule | |
| openEditWindow(event) — Method in class edu.stanford.covertlab.diagram.core.Compartment | |
| double click | |
| openEditWindow(event) — Method in class edu.stanford.covertlab.diagram.core.Membrane | |
| double click | |
| openFindBiomoleculeWindow() — Method in class edu.stanford.covertlab.diagram.core.Diagram | |
| openid — Property in class edu.stanford.covertlab.manager.UserManager | |
| openNetwork(properties) — Method in class edu.stanford.covertlab.networkanalyzer.manager.NetworkManager | |
| open network | |
| openNetworkWindow — Property in class edu.stanford.covertlab.networkanalyzer.manager.NetworkManager | |
| OpenNetworkWindow — Class in package edu.stanford.covertlab.networkanalyzer.window | |
| PopUp window displaying the list of networks, and the properties of those networks, that a user has access to. | |
| OpenNetworkWindow(application, networkManager:edu.stanford.covertlab.networkanalyzer.manager:NetworkManager) — Constructor in class edu.stanford.covertlab.networkanalyzer.window.OpenNetworkWindow | |
| OpenNetworkWindow_ThumbnailTileListItemRenderer — Class in package edu.stanford.covertlab.networkanalyzer.window | |
| Thumbnails in OpenNetworkWindow. | |
| OpenNetworkWindow_ThumbnailTileListItemRenderer() — Constructor in class edu.stanford.covertlab.networkanalyzer.window.OpenNetworkWindow_ThumbnailTileListItemRenderer | |
| OpenNetworkWindow_ThumbnailTileListToolTip — Class in package edu.stanford.covertlab.networkanalyzer.window | |
| Tooltip for thumbnails in OpenNetworkWindow. | |
| OpenNetworkWindow_ThumbnailTileListToolTip(network) — Constructor in class edu.stanford.covertlab.networkanalyzer.window.OpenNetworkWindow_ThumbnailTileListToolTip | |
| optimalLeafOrder — Property in class edu.stanford.covertlab.networkanalyzer.manager.ExperimentManager | |
| orderLeafs(v, S) — Static method in class edu.stanford.covertlab.analysis.HierarchicalClustering | |
| optimal leaf ordering (Bar-Joseph et al, 2001) | |
| organization — Property in class edu.stanford.covertlab.manager.UserManager | |
| org.gif.encoder — Package | |
| Overview — Class in package edu.stanford.covertlab.diagram.overview | |
| Displays a small window which shows the entirety of the current biological network. | |
| Overview(diagram:edu.stanford.covertlab.diagram.core:Diagram) — Constructor in class edu.stanford.covertlab.diagram.overview.Overview | |
| overviewVisible — Property in class edu.stanford.covertlab.diagram.core.Diagram | |
| owner — Property in class edu.stanford.covertlab.networkanalyzer.manager.NetworkManager | |
| A B C D E F G H I J K L M N O P Q R S T U V W X Y Z | |