Selected publications

Full publication list here.


Stabilization of fine-scale host-pathogen diversity by spatiotemporal chaos

Stabilization of fine-scale host-pathogen diversity by spatiotemporal chaos

Michael Pearce, Atish Agarwala, Daniel S. Fisher, In preparation




Adaptive walks on high-dimensional fitness landscapes and seascapes with distance-dependent statistics

Adaptive walks on high-dimensional fitness landscapes and seascapes with distance-dependent statistics

Atish Agarwala, Daniel S. Fisher, bioRxiv (2018): 435669.

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The dynamics of adaptive genetic diversity during the early stages of clonal evolution

The dynamics of adaptive genetic diversity during the early stages of clonal evolution

Jamie Blundell, Katja Schwartz, Danielle Francois, Daniel S. Fisher, Gavin Sherlock, Sasha F Levy, Nature ecology & evolution 3.2 (2019): 293

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Emergent elasticity in the neural code for space

Emergent elasticity in the neural code for space

Sam Ocko, Kiah Hardcastle, Lisa M. Giocomo, Surya Ganguli, Proceedings of the National Academy of Sciences 115.50 (2018): E11798-E11806.

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Hidden complexity of yeast adaptation under simple evolutionary conditions

Hidden complexity of yeast adaptation under simple evolutionary conditions

Yuping Li, Sandeep Venkataram, Atish Agarwala, Barbara Dunn, Dmitri A Petrov, Gavin Sherlock, Daniel S. Fisher, Current Biology. 2018 Feb 19;28(4):515-25.

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Rapid adaptation in large populations with very rare sex: scalings and spontaneous oscillations

Rapid adaptation in large populations with very rare sex: scalings and spontaneous oscillations

Michael Pearce, Daniel S. Fisher, Theoretical population biology (2017)

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Development of a Comprehensive Genotype-to-Fitness Map of Adaptation-Driving Mutations in Yeast

Development of a Comprehensive Genotype-to-Fitness Map of Adaptation-Driving Mutations in Yeast

Sandeep Venkataram, Barbara Dunn, Yuping Li, Atish Agarwala, Jessica Chang, Emily R. Ebel, Kerry Geiler-Samerotte, Lucas Hérissant, Jamie Blundell, Sasha F. Levy, Daniel S. Fisher, Gavin Sherlock, Dmitri A. Petrov, Cell Volume 166, Issue 6, p1585–1596.e22, 8 September 2016

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Quantitative evolutionary dynamics using high-resolution lineage tracking

Quantitative evolutionary dynamics using high-resolution lineage tracking

Sasha F. Levy, Jamie Blundell, Sandeep Venkataram, Dmitri A. Petrov, Daniel S. Fisher, Gavin Sherlock, Nature 519, 181–186 (12 March 2015)

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Acceleration of evolutionary spread by long-range dispersal

Acceleration of evolutionary spread by long-range dispersal

Oskar Hallatschek, Daniel S. Fisher, Proceedings of the National Academy of Sciences 111.46 (2014): E4911-E4919

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Asexual Evolution Waves: Fluctuations and Universality

Asexual Evolution Waves: Fluctuations and Universality

Daniel S. Fisher, Journal of Statistical Mechanics: Theory and Experiment, Volume 2013, January 2013

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